Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899900.1_cds_XP_016449934.1_44436
CDS Infomation

[gene=LOC107774799] [db_xref=GeneID:107774799] [protein=protein NEN1-like] [protein_id=XP_016449934.1] [location=complement(join(8697..8928,9338..10071,11371..11434,13029..13075,13281..13438,14473..14743))] [gbkey=CDS]
Sequence

ATGGAAGATAGGTCGGAGATAGTATTTTTCGACGTAGAGACAACAATTCCGACACGAACC
GGACAGGGATATGCACTCTTGGAATTTGGGGCAATTCTCATTTGCCCGAGGAAGCTTGTG
GAGCAGGAGAATTACTCCACCCTCGTACGACCTGACGACCTCTCTCTCATTTCCCAACTT
TCTGTTCGGTGCAATGGTATTACCGGAGATGCTGTCACTTCTGCCCCTACCTTCGCTGAT
ATTGCCGACAAAGTTTTTGACATTCTCCATGGGAGGATATGGGCGGGCCACAATATTCTG
AAATTCGATTGTCCAAGGATTCGGGAGGCGTTTGCTGGAATTAATAGGCCTGCACCAGAA
CCCAAGGGAACAATTGATACTCTTGCTTTGTTGACCCAAAGATTTGGAAGGAGAGCTGGT
AACATGAAGATGGCCTCTCTTGCTACTTATTTTGGCCTTGGACAGCAAACACATAGGAGT
TTGGATGATGTTCGAATGAATTTTGAAGTACTAAAATACTGTGCAACTGTCTTGTTTTTG
GAATCCAGCCTGCCTGAGATATTAACTGAGAACAGTTGGGTGTCTCCTAATACTGCTATA
AGAAGTCGCACTAACGGAAATGCTGTTCTGGAGGGGATGGGCTCCAGTACAGATATACCT
TCATCGAGTGTCAAGATAGAAAGTCTGAAATCTATTGCAGAAGACAACATAGAATCAGAT
CATCCAATATTTCCACTTGTAAGCAGAAATGTGGAGATACCACATCTTCCTGAAACAAAT
TCCTCTAGGCCCGACGCTTTTAACTTGGTCCAATTGAGCGCCGAAGTAAGGGAATCCATT
CAGTTAGACGACATGGAAGAAGAACCTGGTTCAGCAGATTCTCGACAATCTTCTGCATCA
ACTGCAACAGGAGGTTACATTGGCTGCACTGACTTCTTAGAACCAAATAATATTTCAATT
TCTTCTGTCTCCGTAATTCTAGCGCCCTTTTATCGTGGGACTCAGAAGCTACAAATCTTG
TACAACAATGCTGAATTGCAAGTTTGCTCTAGATCCCTGAAGGTGCGGTTTGGAATTAGT
ACTAGGTTTGTTGATTATGCTGGTCGGCCACGGTTGAGTTTTGTGGTGGAGGCATCATCA
GACCTATGCCAACTTTTGGATGCAATTGATAATCTTGTGCAGAAATTAAATGAGGATACA
GGTAGCATGTCAGAATGGAGGCCTGTGGTAAGCAGAAAGCCTGGCTTTATGAACTGTCCT
ACCATTCGTTTAAATTTACCAACTGCGGTGGATGCTAATATCTCTCGCTGGGTCACAGAG
ATATACCAGAAAGAGTCTTCCACAACACAGAAGCTCATGTTCAATAGGTTTGATGTGGCA
GAACTGGATTCCTTGATTACACCAGGAACTCTGTTGGATGCATATTTCTCGGTGGATTCA
TACGACTACCAACAGACTGCAGGCATCCGCTTGGTGGCGAAAAAGTTAGTTGTGCATTCC
TCCTGA

Peptide Sequence

PEP ID

XP_016449934.1
PEP Infomation

PREDICTED: protein NEN1-like [Nicotiana tabacum]
Sequence

MEDRSEIVFFDVETTIPTRTGQGYALLEFGAILICPRKLVEQENYSTLVRPDDLSLISQL
SVRCNGITGDAVTSAPTFADIADKVFDILHGRIWAGHNILKFDCPRIREAFAGINRPAPE
PKGTIDTLALLTQRFGRRAGNMKMASLATYFGLGQQTHRSLDDVRMNFEVLKYCATVLFL
ESSLPEILTENSWVSPNTAIRSRTNGNAVLEGMGSSTDIPSSSVKIESLKSIAEDNIESD
HPIFPLVSRNVEIPHLPETNSSRPDAFNLVQLSAEVRESIQLDDMEEEPGSADSRQSSAS
TATGGYIGCTDFLEPNNISISSVSVILAPFYRGTQKLQILYNNAELQVCSRSLKVRFGIS
TRFVDYAGRPRLSFVVEASSDLCQLLDAIDNLVQKLNEDTGSMSEWRPVVSRKPGFMNCP
TIRLNLPTAVDANISRWVTEIYQKESSTTQKLMFNRFDVAELDSLITPGTLLDAYFSVDS
YDYQQTAGIRLVAKKLVVHSS

Transcript Sequence

Gene sequence data has not been registered.